PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A05G0677
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 1318aa    MW: 148665 Da    PI: 6.139
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A05G0677genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.2e-10222256438
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                   k  rr+++NReAAr+sR+RKka++++Le    +L
  Gh_A05G0677 222 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKL 256
                  6889************************9754444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-6219286IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.14221265IPR004827Basic-leucine zipper domain
PfamPF001705.6E-7222263IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-6223266No hitNo description
CDDcd147088.22E-23223275No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-6225253No hitNo description
PROSITE patternPS000360226241IPR004827Basic-leucine zipper domain
PfamPF141445.3E-29304379IPR025422Transcription factor TGA like domain
SMARTSM013353.7E-17600653IPR012982PADR1 domain
PfamPF080631.4E-17603652IPR012982PADR1 domain
PROSITE profilePS5017216.928687780IPR001357BRCT domain
SMARTSM002924.7E-12689770IPR001357BRCT domain
PfamPF005338.2E-11689767IPR001357BRCT domain
SuperFamilySSF521132.22E-16689778IPR001357BRCT domain
Gene3DG3DSA:3.40.50.101901.6E-17689778IPR001357BRCT domain
CDDcd000271.06E-9694768No hitNo description
SuperFamilySSF1429211.96E-25804933IPR008893WGR domain
CDDcd080012.82E-35831935No hitNo description
SMARTSM007736.1E-23839922IPR008893WGR domain
PfamPF054064.3E-12839918IPR008893WGR domain
Gene3DG3DSA:1.20.142.104.5E-239231091IPR004102Poly(ADP-ribose) polymerase, regulatory domain
PROSITE profilePS5106019.6789551074IPR004102Poly(ADP-ribose) polymerase, regulatory domain
CDDcd014371.59E-1129551306No hitNo description
SuperFamilySSF475877.72E-299551091IPR004102Poly(ADP-ribose) polymerase, regulatory domain
PfamPF028771.5E-209561089IPR004102Poly(ADP-ribose) polymerase, regulatory domain
PROSITE profilePS5105964.56310831314IPR012317Poly(ADP-ribose) polymerase, catalytic domain
SuperFamilySSF563992.4E-4610921310No hitNo description
PfamPF006448.0E-5110931307IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene3DG3DSA:3.90.228.105.1E-5010941308IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006471Biological Processprotein ADP-ribosylation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1318 aa     Download sequence    Send to blast
MENHRIGKTG LTNSGPSSNY HHHAVLHGMN APIIEIDAFN MFALLISLKG CRFLSISHQN  60
GPAFGFGELE EAIVPHGVEL TNDEAKAPAL FTRSRPSSAA LEMLPSNWSL RFQQTPRGSW  120
NSRGESTDSV SSSAVNTLPS NQLQPESPIS QKASSSADHH QLFNHKPLQQ QRLEMASDIS  180
SLNQSAAQEK LQEQESHNNQ QSATLPRNFG RGSSSSDKQL DAKTLRRLAQ NREAARKSRL  240
RKKAYVQQLE SSRIKLAQLE QDLQRTRSRG FFVGGCAAAF GNISSGAARF DMEYSRWLED  300
DHRHLSELRT GLHAHLPDTD LQTIVDGYIS HYDKLFRLKE AAAKSDVLHL ITGMWMTPVE  360
RCFVWIGDFR PSELIKMLVS QLDPLTEHQV MGICNLQHSS QQAEEALTLG LEQLYHSLID  420
SIAGGPVIHE MQQMAVALSK LANLEGFLHQ ADNLRQQILH QLPRILTVRQ TARCFLVIGE  480
YNQRLRVLSS LWTPHGPPEL RMNQLHEKRS HSHAHGTGDE EKIMTRKQKA DQLKSNEGNE  540
SPKKPKVEAD NDQHNGKTTT EVAKEFEEFC KSVREHLSVA QMREILEANG QDSSGSDASV  600
VIKCLDMLFY GPLEKCQICN GDLEFDGNRY SCKGTYSEWS SCVYKTRSPA RKQEPFKLPD  660
SVLNSPVAEL VKKYEDPKLR PHRYVGVTDK PFLGMMISLM GRLSRTHQYW KTKIEKHGGT  720
VSNSVIGSVT CLVASPAERE RGGSSKLVEA MERGVRVVSE AWLLDSIEKQ EAQPLEAYDI  780
VTDLAVDGKG IPWDKQVPEE HAIESLSAEL KLYGKRGVYK DTRLQEQGGQ IFEEDGILYN  840
CVFSLCDQGG AINEYCIMQL VKVPDSNLHL YYKKGRVGDD PNAQERLEEW KDVDGAVEEF  900
VRLFEEVTGN EFEPWEREKK FQKKPLKFYP IDMDDGVDVR CGGLGLRQLG VAAAHCKLEP  960
MVANFMKVLC SQEIYKYALM EMDLDAPDLP MGMLSNVHLE RCEEVLQEFI EKVKSMKESG  1020
PKAEAVWSDF SQRWFTLMHS SRPFIFRDYQ ELADHAAASF ECVRDIVVAS HMIGHMGDDT  1080
LDDPLSDRYK KIGCSISPLD KDSEDYKMIL NYVEKTYEPV KLADIEYGIS VENIFNVETK  1140
EGPSFDEVKK LPNKRLLWCG TRSSNLLRHL HKGFLPASCS LSVPGYMFGK GIVCSDAAAE  1200
AARYGFTAVD RPEGFLVLAV FSQGEEIMEL KNPPEDTKPL EEKKVCVKGL GRKKPDESEY  1260
IDWKDDIKVP CGRLIPSEHQ DSPLEYNEYT VYDPKQVSMR FLVGVKFEEK DTVMDAQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4opx_C4e-5980913137496Poly [ADP-ribose] polymerase 1
4opx_F4e-5980913137496Poly [ADP-ribose] polymerase 1
4oqa_C4e-5980913137496Poly [ADP-ribose] polymerase 1
4oqa_F4e-5980913137496Poly [ADP-ribose] polymerase 1
4oqb_C4e-5980913137496Poly [ADP-ribose] polymerase 1
4oqb_F4e-5980913137496Poly [ADP-ribose] polymerase 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX5816737e-41JX581673.1 Gossypium hirsutum clone NBRI_GE14350 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012442462.10.0PREDICTED: poly
SwissprotQ9SWB40.0PARP3_SOYBN; Poly [ADP-ribose] polymerase 3
TrEMBLA0A0B0NJ650.0A0A0B0NJ65_G
STRINGGLYMA11G19070.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1214922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-146bZIP family protein